MTB Seminar Talk List

Unless announced otherwise, the seminar takes place monthly on the fourth Wednesday at 10.30am.
Location: Hörsaal der Klinik für Hämatologie und Onkologie: 0 A2 006

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• Prof. Dr. Jan Baumbach (Director of the Institute for Computational Systems Biology/ University of Hamburg)

2024

• Prof. Dr. Jan Baumbach (Universität Hamburg, Fakultät für Mathematik, Informatik und Naturwissenschaften Zentrum für Bioinformatik
  Date: 24.04.2024 at 12.30
  Title: My health, my data - Privacy-preserving prognostic model learning on distributed data for MTB decision support

2023

• Dr. Johannes Raffler (Leitung AG Klinisch-wissenschaftliche Digitalisierung; Universitätsklinikum Augsburg)Date: 22.11.2023
• Klara Drofenik (Department of Medical Bioinformatics, UMG)
  Date: 25.10.2023
  Title: Developing a classifier to differentiate between pathogenic and non-pathogenic variants based on 3D protein structure prediction
• Nadine Kurz (PhD student, Department of Medical Bioinformatics, UMG)
  Date: 23.08.2023
  Title: Cancer variant interpretation with Onkopus: Pathogenicity prediction and clinical actionability of molecular targets
• Jingyu Yang (PhD student, Department of Medical Bioinformatics, UMG)
  Date: 26.07.2023, 10.30am
  Title: BRCAness Phenotype analysis by GCNN/LRP
• Prof. Dr. Oliver Kohlbacher (Dept. of Computer Science, University of Tübingen, Center for Bioinformatics and Medical Informatics, University of Tübingen, Institute for Translational Bioinformatics, University Hospital Tübingen
  Date: 25.5.2023, 10.30am
  Title: Data Infrastructures for Molecular Tumor Boards
• Prof. Dr. Jan Christoph (Friedrich Alexander Universität, Institut für Medizininformatik, Biometrie und Epidemiologie)
  Lehrstuhl für Medizinische Informatik
  Date: 26.04.2023; 10.30am
  Title: From Knowledge to Action - IT support for the Molecular Tumor Board - born in MIRACUM, variously arrived
• Kevin Kornrumpf, Department of Medical Bioinformatics (UMG), PhD
  Date: 22.3.2023; 10.3
  Title: Establishment of a new copy number variation database for the analysis of relevant genes in different cancer entities
• Alexander Knurr, DKFZ Heidenberg, AG Secondary Use of Data in Oncology (SUDO); Knowledge Connector
  Date: 22. 2. 2023; 10.30am
  Title: Knowledge Connector: Decision Support System for Multiomics-based Precision Oncology
• Nadine Kurz, PhD, Department of Medical Bioinformatics
  Date: 25.01.2023; 10.30am
  Title: Onkopus: A Decision Support Framework for Evidence-Based Interpretation of Biomarkers in Cancer Research and Precision Medicine

2022

• Nicole Schmidt (PhD), AG Koch (UMG)
  Date: 5.10.2022, 10.30
  Title: Targeting DNA damage response in peripheral T-cell lymphomas
• Jonas Hügel (PhD), Institut für Medizininformatik
  Date: 25.05.2022
  Title: Enhancing an phenotyping approach for the usage of MTB data
• Prof. Dr. Günter Schneider (Clinic for General, Visceral and Paediatric Surgery, UMG) (AG Schneider)
  Date: 27.04.2022
  Title: Functional Precision Oncology in Pancreatic Cancer?
• Prof. Dr. Ulrich Mansmann(Director of the Institute for Medical Information Processing Biometry and Epidemiology (LMU Munich)
  Date: postponed, new date will be announced
• Prof. Dr. med. Elisabeth Heßmann (Clinic for Gastroenterology, Gastrointestinal Oncology & Endocrinology, UMG, AG Hessmann)
  Date: 23.2.2022, 10:30
  Titel: Insights into the concept and work of the Clinical Research Unit KFO5002 “Deciphering Genome Dynamics for subtype-specific therapy in Pancreatic Cancer”
• Maximillian Jahn (Medical Informatics, UMG)
  Date: 26.1.2022, 10:30
  Titel: Integration of cBioPortal in the UMG using the example of the Molecular Tumor Board

2021

• Prof. Dr. Hauke Busch (CRIS | Center for Research on Inflammation of the Skin; University to Lübeck)
  Topic: A bottom-up Implementation of a Molecular Tumor Board at the University Hospital Schleswig Holstein
  Date: 22. 12., 10:30
• Kevin Kornrumpf (PhD, Department of Medical Bioinformatics)
  Topic: Copy Number Variations - From medical analysis to a bioinformatics approach.
  Date: 24.11., 10.30
• Dr Björn Chapuy (Klinik für Hämotologie und Med. Onkologie (UMG); Klinik für Hämatologie und Onkologie (Charite Universitätsmedizin Berlin)
  Topic: tba
  Date: 27.10., 10.30
• Jonas Hügel (Medical Informatics, UMG)
  Topic: A (semi-) automated data import into Onkostar
  Date: 22. 9., 10:30
• Michael Piechotta (Humbold University Berlin (Group Ulf Leser)
  Titel: I-VIS: A Toolkit for Integrated Variant Information System
  Date: 25. 8., 10:30am
• Jingyu Yang (PhD, Department of Medical Bioinformatics)
  Topic: DNA-seq-pipeline for molecular tumor board platform (Onkopus)
  Date: 28.7., 10.30 am
• Prof. Dr. Dr. Melanie Börries (Head of the Institute of Medical Bioinformatics and Systems Medicine (IBSM) Freiburg)
  Title: Experiences of the molecular tumor board in Freiburg: data - tools - report
  Date: 23th of June, 10.30am
  Confernce Link: https://uni-goettingen.zoom.us/j/93739405063https://uni-goettingen.zoom.us/j/93739405063
• Myrine Holm (Medical Student, UMG)
  Title: Modeling and creating the drug ontology DrugOn
  Date: 26th of May, 10.30 am
• Kevin Kornrumpf (PhD student: Department of Medical Bioinformatics)
  Title: Analysis of the correlation between genetic background and drug response of a drug screen in t-cell lymphoma cell lines
  Date: 28th of April, 10.30 am
• Prof. Dr. Tibor Kesztyüs
  Title: "Medical Informatics Initiative (MII), HiGHMed, MeDIC and the potential implications for oncology - more particularly molecular oncology."
  Date: 24th of March, 10.30 am
• Nicole Schmidt (PhD Student Arbeitsgruppe Koch – Max-Eder Nachswuchsgruppe)
  Title: "Wetlab workflow - Drug screening"
  Date: 24th of February, 10.30 am
• Philip Stegmaier
  Title: Developing a workflow for patient-specific analysis of pathways and network
  Date: 27th of January, 10.30 am

2020

• Prof. Dr. Tibor Kesztyüs
  Title: 
  Date: 16th of December; 10.30am. Talk is cancelled due to illness! We will inform as soon as we find a new date. 

• Charlotte Höltermann
  Title: "Application of MTB report in an analysis of in vitro T-cell lymphoma models"
  Date: 25th of November, 10.30am
   
• Jonas Hügel 
  Title: Aspects of Patient Similarity Searches in Molecular Tumorboards
  Date: 28th of October, 11.00am
   
• Prof. Dr. Ulf Leser
  Title: Knowledge Management for Molecular Tumor Boards
  Date: 23rd of September, 12.30pm
   
• Dr. Kirsten Reuter-JessenandJonas Hügel
  Title: Sequencing workflow in the mol patho and surrounding workflows for the molTB
  Date: 26th of August, 10.30am
   
• Jingyu Yang
  Title:  Concept of the PhD thesis in the context of MTB project
  Date: 22nd of July, 10.30am
   
• Vanessa Schlotzig
  Title: Comparison of different MTB tools
  Date: 22nd of May, 10.30am
   
• Dr. Li Beißbarth
  Title: Example of case processing for molecular tumor boards at the UMG
  Date: Wed. 27th May, 10.30am
   
• Dr. Jürgen Dönitz
  Title: search.cancervariants.org,a model for a local knowledge repository?
  Date: Wed. 29th April, 10.30am